PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_67797.2
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family bHLH
Protein Properties Length: 92aa    MW: 10679.6 Da    PI: 11.3348
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_67797.2genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.90.000432550630
                  HHHHHHHHHHHHHHHHHHHCTSCC.C CS
           HLH  6 nerErrRRdriNsafeeLrellPk.a 30
                  +++E rRR +i ++  +L+el+P+  
  MLOC_67797.2 25 SIAELRRRTEISKRVRNLQELVPNmE 50
                  789********************944 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.107.3E-42451IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 92 aa     Download sequence    Send to blast
MAEISNRIQE LVPKVKKDRS SHRRSIAELR RRTEISKRVR NLQELVPNME KVIKQTVGTP  60
KPYTDMALPG INPLVVRNCW TVLLSHLFHV PN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3557751e-101AK355775.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1025K07.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLM0YC604e-62M0YC60_HORVD; Uncharacterized protein
STRINGMLOC_27257.12e-37(Hordeum vulgare)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.12e-09bHLH family protein